Gene: OSINDICA_03G55120 (Oryza sativa ssp. indica)

Overview top

Gene Identifier
OSINDICA_03G55120
Transcript Identifier
OSINDICA_03G55120.1
Gene Type
Coding gene
Location
Chr03 : 37174031-37178859 : negative

Family

Gene family
HOM03M000077
(598 genes in 16 species)
specific family
Subfamily
ORTHO03M000526
(14 genes in 11 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
enzyme E2 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameOsIFCC008562

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511ISOPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT5G62540 AT2G02760
GO:0009650ISOPLAZA Integrative OrthologyUV protectionAT2G02760
GO:0033523ISOPLAZA Integrative Orthologyhistone H2B ubiquitinationAT2G02760
GO:0010228ISOPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT2G02760

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016881IEAInterProacid-amino acid ligase activity
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT5G62540 AT2G02760
GO:0016874IEAPLAZA Homologyligase activityHOM03M000077
GO:0016879IEAPLAZA Homologyligase activity, forming carbon-nitrogen bondsHOM03M000077
GO:0003824IEAPLAZA Homologycatalytic activityHOM03M000077

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT2G02760

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR023313Ubiquitin-conjugating enzyme, active site
IPR000608Ubiquitin-conjugating enzyme, E2
IPR016135Ubiquitin-conjugating enzyme/RWD-like

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.