Gene: OSINDICA_03G52520 (Oryza sativa ssp. indica)

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Gene Identifier
OSINDICA_03G52520
Transcript Identifier
OSINDICA_03G52520.1
Gene Type
Coding gene
Location
Chr03 : 35580881-35592127 : positive

Family

Gene family
HOM03M000940
(74 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Eukaryotic translation initiation factor 5A
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameOsIFCC008389

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006452IEAInterProtranslational frameshifting
GO:0045905IEAInterPropositive regulation of translational termination
GO:0008612IEAInterPropeptidyl-lysine modification to hypusine
GO:0045901IEAInterPropositive regulation of translational elongation
GO:0006449IEAPLAZA Homologyregulation of translational terminationHOM03M000940
GO:0046516IEAPLAZA Homologyhypusine metabolic processHOM03M000940

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0003723IEAInterProRNA binding
GO:0043022IEAInterProribosome binding
GO:0003746IEAInterProtranslation elongation factor activity

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001680WD40 repeat
IPR001884Translation elongation factor IF5A
IPR008991Translation protein SH3-like domain
IPR012674Calycin
IPR014722Ribosomal protein L2 domain 2
IPR017986WD40-repeat-containing domain
IPR020189Translation elongation factor, IF5A C-terminal
IPR019775WD40 repeat, conserved site
IPR011038Calycin-like
IPR015943WD40/YVTN repeat-like-containing domain
IPR019769Translation elongation factor, IF5A, hypusine site
IPR012340Nucleic acid-binding, OB-fold
IPR022017Domain of unknown function DUF3598

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.