PLAZA 3.0 Monocots gene overview : OSINDICA_03G49960

Gene: OSINDICA_03G49960 (Oryza sativa ssp. indica)

Overview

Gene Identifier: OSINDICA_03G49960
Transcript Identifier: OSINDICA_03G49960.1
Gene Type: Coding gene
Location: Chr03 : 33832475-33834231 : negative

Family

Gene family: HOM03M000616
(110 genes in 16 species)
specific family
Subfamily: ORTHO03M005720
(6 genes in 4 species)
specific family

Loading...please wait

Descriptions

Description: 1-aminocyclopropane-1-carboxylate synthase 1

Description (AnnoMine): 1-aminocyclopropane-1-carboxylate synthase

Identifiers

Identifier	Name
name	OsIFCC008193
uniprot	A2XLL2

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0042218	IEA	UniProt	1-aminocyclopropane-1-carboxylate biosynthetic process	1 2 3
GO:0009693	IEA	UniProt	ethylene biosynthetic process	1 2 3
GO:0009835	IEA	UniProt	fruit ripening	1 2 3
GO:0009058	IEA	InterPro	biosynthetic process
GO:0009735	ISO	PLAZA Integrative Orthology	response to cytokinin	AT5G65800
GO:0006417	ISO	PLAZA Integrative Orthology	regulation of translation	AT3G49700
GO:0071281	ISO	PLAZA Integrative Orthology	cellular response to iron ion	AT3G49700 AT2G22810
GO:0009733	ISO	PLAZA Integrative Orthology	response to auxin	AT2G22810

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016847	IEA	UniProt	1-aminocyclopropane-1-carboxylate synthase activity	1 2 3
GO:0030170	IEA	UniProt	pyridoxal phosphate binding	1 2 3
GO:0003824	IEA	InterPro	catalytic activity
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT5G65800 AT4G37770 AT3G49700 AT2G22810
GO:0042802	ISO	PLAZA Integrative Orthology	identical protein binding	AT4G37770 AT2G22810

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR015424	Pyridoxal phosphate-dependent transferase
IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR004839	Aminotransferase, class I/classII
IPR004838	Aminotransferases, class-I, pyridoxal-phosphate-binding site
IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.