Gene: OSINDICA_03G04830 (Oryza sativa ssp. indica)

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Gene Identifier
OSINDICA_03G04830
Transcript Identifier
OSINDICA_03G04830.1
Gene Type
Coding gene
Location
Chr03 : 3286118-3294139 : positive

Family

Gene family
HOM03M000279
(195 genes in 16 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
Probable lysine-specific demethylase ELF6
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameOsIFCC005202

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0033169ISOPLAZA Integrative Orthologyhistone H3-K9 demethylationAT5G04240
GO:0009826ISOPLAZA Integrative Orthologyunidimensional cell growthAT5G04240
GO:0009741ISOPLAZA Integrative Orthologyresponse to brassinosteroidAT5G04240
GO:0048579ISOPLAZA Integrative Orthologynegative regulation of long-day photoperiodism, floweringAT5G04240
GO:0048577ISOPLAZA Integrative Orthologynegative regulation of short-day photoperiodism, floweringAT5G04240
GO:0006355ISOPLAZA Integrative Orthologyregulation of transcription, DNA-dependentAT5G04240

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0003676IEAInterPronucleic acid binding
GO:0046872IEAInterPrometal ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G04240

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007087Zinc finger, C2H2
IPR003347JmjC domain
IPR015880Zinc finger, C2H2-like
IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
IPR003349Transcription factor jumonji, JmjN

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBJumonji