PLAZA 3.0 Monocots gene overview : OSINDICA_02G55170

Gene: OSINDICA_02G55170 (Oryza sativa ssp. indica)

Overview

Gene Identifier: OSINDICA_02G55170
Transcript Identifier: OSINDICA_02G55170.1
Gene Type: Coding gene
Location: Chr02 : 37051824-37055276 : positive

Family

Gene family: HOM03M000286
(190 genes in 16 species)
specific family

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Descriptions

Description: Alcohol dehydrogenase class-3

Description (AnnoMine): Alcohol dehydrogenase class-3

Identifiers

Identifier	Name
name	OsIFCC015839
uniprot	A2XAZ3

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0008219	IEA	UniProt	cell death	1 2
GO:0006069	IEA	UniProt	ethanol oxidation	1 2
GO:0046292	IEA	UniProt	formaldehyde metabolic process	1 2
GO:0010286	IEA	UniProt	heat acclimation	1 2
GO:0009684	IEA	UniProt	indoleacetic acid biosynthetic process	1 2
GO:0019288	IEA	UniProt	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1 2
GO:0051049	IEA	UniProt	regulation of transport	1 2
GO:0048316	IEA	UniProt	seed development	1 2
GO:0006569	IEA	UniProt	tryptophan catabolic process	1 2
GO:0055114	IEA	InterPro	oxidation-reduction process

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004022	IEA	UniProt	alcohol dehydrogenase (NAD) activity	1 2
GO:0051903	IEA	UniProt	S-(hydroxymethyl)glutathione dehydrogenase activity	1 2
GO:0080007	IEA	UniProt	S-nitrosoglutathione reductase activity	1 2
GO:0008270	IEA	UniProt	zinc ion binding	1 2
GO:0016491	IEA	InterPro	oxidoreductase activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005829	IEA	UniProt	cytosol	1 2
GO:0005777	IEA	UniProt	peroxisome	1 2

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR013149	Alcohol dehydrogenase, C-terminal
IPR011032	GroES (chaperonin 10)-like
IPR002085	Alcohol dehydrogenase superfamily, zinc-type
IPR014183	Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase
IPR016040	NAD(P)-binding domain
IPR013154	Alcohol dehydrogenase GroES-like
IPR002328	Alcohol dehydrogenase, zinc-type, conserved site

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.