Gene: OSINDICA_02G30620 (Oryza sativa ssp. indica)

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Gene Identifier
OSINDICA_02G30620
Transcript Identifier
OSINDICA_02G30620.1
Gene Type
Coding gene
Location
Chr02 : 20461531-20466800 : negative

Family

Gene family
HOM03M003071
(28 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Staphylococcal nuclease domain-containing protein 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameOsIFCC014119

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT5G07350 AT5G61780
GO:0009306ISOPLAZA Integrative Orthologyprotein secretionAT5G07350 AT5G61780
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT5G07350 AT5G61780
GO:0009686ISOPLAZA Integrative Orthologygibberellin biosynthetic processAT5G61780
GO:0009845ISOPLAZA Integrative Orthologyseed germinationAT5G61780

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016788IEAInterProhydrolase activity, acting on ester bonds
GO:0003676IEAInterPronucleic acid binding
GO:0003723ISOPLAZA Integrative OrthologyRNA bindingAT5G07350 AT5G61780

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G07350
GO:0005618ISOPLAZA Integrative Orthologycell wallAT5G07350
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G07350
GO:0005635ISOPLAZA Integrative Orthologynuclear envelopeAT5G07350 AT5G61780
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT5G07350 AT5G61780
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G07350 AT5G61780
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT5G61780

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016071Staphylococcal nuclease (SNase-like), OB-fold
IPR002999Tudor domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.