Gene: OSINDICA_01G55670 (Oryza sativa ssp. indica)

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Gene Identifier
OSINDICA_01G55670
Transcript Identifier
OSINDICA_01G55670.1
Gene Type
Coding gene
Location
Chr01 : 37336673-37341427 : positive

Family

Gene family
HOM03M002916
(30 genes in 15 species)
specific family
Subfamily
ORTHO03M004664
(7 genes in 7 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
Apurinic endonuclease-redox protein
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameOsIFCC003730

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281IEAInterProDNA repair
GO:0045893ISOPLAZA Integrative Orthologypositive regulation of transcription, DNA-dependentAT2G41460

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004518IEAInterPronuclease activity
GO:0004519IEAInterProendonuclease activity
GO:0003676IEAInterPronucleic acid binding
GO:0003677IEAInterProDNA binding
GO:0003906ISOPLAZA Integrative OrthologyDNA-(apurinic or apyrimidinic site) lyase activityAT2G41460

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAInterProintracellular
GO:0042644ISOPLAZA Integrative Orthologychloroplast nucleoidAT2G41460

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003034SAP domain
IPR005135Endonuclease/exonuclease/phosphatase
IPR004808AP endonuclease 1
IPR020847AP endonuclease 1, binding site
IPR020848AP endonuclease 1, conserved site

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.