Gene: OSINDICA_01G45660 (Oryza sativa ssp. indica)

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Gene Identifier
OSINDICA_01G45660
Transcript Identifier
OSINDICA_01G45660.1
Gene Type
Coding gene
Location
Chr01 : 30937138-30940239 : negative

Family

Gene family
HOM03M000077
(598 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Putative ubiquitin-conjugating enzyme E2 N-like
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameOsIFCC003000

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511ISOPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT1G16890 AT1G78870
GO:0010039ISOPLAZA Integrative Orthologyresponse to iron ionAT1G16890 AT1G78870
GO:0010053ISOPLAZA Integrative Orthologyroot epidermal cell differentiationAT1G16890 AT1G78870
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT1G78870
GO:0006301ISOPLAZA Integrative Orthologypostreplication repairAT1G78870

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016881IEAInterProacid-amino acid ligase activity
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT1G16890 AT1G78870
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT1G16890 AT1G78870
GO:0016874IEAPLAZA Homologyligase activityHOM03M000077
GO:0016879IEAPLAZA Homologyligase activity, forming carbon-nitrogen bondsHOM03M000077
GO:0003824IEAPLAZA Homologycatalytic activityHOM03M000077

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT1G16890
GO:0031372ISOPLAZA Integrative OrthologyUBC13-MMS2 complexAT1G16890 AT1G78870
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G16890

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016135Ubiquitin-conjugating enzyme/RWD-like
IPR023313Ubiquitin-conjugating enzyme, active site
IPR000608Ubiquitin-conjugating enzyme, E2

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.