Gene: OSINDICA_01G17700 (Oryza sativa ssp. indica)

Overview top

Gene Identifier
OSINDICA_01G17700
Transcript Identifier
OSINDICA_01G17700.1
Gene Type
Coding gene
Location
Chr01 : 11402128-11402961 : positive

Family

Gene family
HOM03M000282
(193 genes in 13 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
MADS-box transcription factor PHERES 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameOsIFCC036461

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT1G65330
GO:0006355ISOPLAZA Integrative Orthologyregulation of transcription, DNA-dependentAT1G22590
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000282
GO:0006351IEAPLAZA Homologytranscription, DNA-templatedHOM03M000282

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983IEAInterProprotein dimerization activity
GO:0003677IEAInterProDNA binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G48670
GO:0003700IEAPLAZA Homologysequence-specific DNA binding transcription factor activityHOM03M000282
GO:0043565IEAPLAZA Homologysequence-specific DNA bindingHOM03M000282

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0043078ISOPLAZA Integrative Orthologypolar nucleusAT5G48670
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G48670
GO:0090406ISOPLAZA Integrative Orthologypollen tubeAT1G65330

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002100Transcription factor, MADS-box

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBMADS
PlantTFDBM-type