Gene: OSINDICA_00G19930 (Oryza sativa ssp. indica)

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Gene Identifier
OSINDICA_00G19930
Transcript Identifier
OSINDICA_00G19930.1
Gene Type
Coding gene
Location
Scaffold001288 : 1190-1666 : negative

Family

Gene family
HOM03M000233
(222 genes in 16 species)
specific family
Subfamily
ORTHO03M008656
(5 genes in 5 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
protease proteolytic subunit
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameOsIFSC047950

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006508IEAInterProproteolysis
GO:0048510ISOPLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phaseAT5G45390
GO:0009658ISOPLAZA Integrative Orthologychloroplast organizationAT5G45390

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004252IEAInterProserine-type endopeptidase activity
GO:0070011IEAPLAZA Homologypeptidase activity, acting on L-amino acid peptidesHOM03M000233
GO:0004175IEAPLAZA Homologyendopeptidase activityHOM03M000233
GO:0008236IEAPLAZA Homologyserine-type peptidase activityHOM03M000233
GO:0008233IEAPLAZA Homologypeptidase activityHOM03M000233
GO:0017171IEAPLAZA Homologyserine hydrolase activityHOM03M000233

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009579ISOPLAZA Integrative OrthologythylakoidAT5G45390
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G45390
GO:0009532ISOPLAZA Integrative Orthologyplastid stromaAT5G45390
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT5G45390
GO:0009840ISOPLAZA Integrative Orthologychloroplastic endopeptidase Clp complexAT5G45390
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT5G45390
GO:0009535ISOPLAZA Integrative Orthologychloroplast thylakoid membraneAT5G45390

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR001907ClpP
IPR018215ClpP, active site

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.