Gene: OSINDICA_00G18940 (Oryza sativa ssp. indica)

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Gene Identifier
OSINDICA_00G18940
Transcript Identifier
OSINDICA_00G18940.1
Gene Type
Coding gene
Location
Scaffold015478 : 615-3164 : positive

Family

Gene family
HOM03M003276
(27 genes in 3 species)
specific family

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Descriptions

Description (AnnoMine)
Octopine catabolism/uptake operon regulatory protein OccR
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameOsIFSC047021

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0035556IEAInterProintracellular signal transduction
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0009190IEAInterProcyclic nucleotide biosynthetic process
GO:0009187IEAPLAZA Homologycyclic nucleotide metabolic processHOM03M003276

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700IEAInterProsequence-specific DNA binding transcription factor activity
GO:0016849IEAInterProphosphorus-oxygen lyase activity

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000847Transcription regulator HTH, LysR
IPR001054Adenylyl cyclase class-3/4/guanylyl cyclase
IPR005119LysR, substrate-binding
IPR000160GGDEF domain
IPR011991Winged helix-turn-helix DNA-binding domain
IPR004010Cache domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.