Gene: OSINDICA_00G03410 (Oryza sativa ssp. indica)

Overview top

Gene Identifier
OSINDICA_00G03410
Transcript Identifier
OSINDICA_00G03410.1
Gene Type
Coding gene
Location
Scaffold021321 : 57-2508 : negative

Family

Gene family
HOM03M003276
(27 genes in 3 species)
specific family

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Descriptions

Description (AnnoMine)
Phytochrome-like protein cph2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameOsIFSC047504

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0035556IEAInterProintracellular signal transduction
GO:0007165IEAInterProsignal transduction
GO:0000160IEAInterProphosphorelay signal transduction system
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0009190IEAInterProcyclic nucleotide biosynthetic process
GO:0009187IEAPLAZA Homologycyclic nucleotide metabolic processHOM03M003276

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0016849IEAInterProphosphorus-oxygen lyase activity
GO:0000166IEAInterPronucleotide binding
GO:0004871IEAInterProsignal transducer activity
GO:0000155IEAInterProphosphorelay sensor kinase activity
GO:0003677IEAInterProDNA binding

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000160GGDEF domain
IPR000014PAS domain
IPR000551MerR-type HTH domain
IPR009061DNA binding domain, putative
IPR001054Adenylyl cyclase class-3/4/guanylyl cyclase
IPR000700PAS-associated, C-terminal
IPR001610PAC motif
IPR013656PAS fold-4
IPR013655PAS fold-3

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.