Gene: OSINDICA_00G00020 (Oryza sativa ssp. indica)

Overview top

Gene Identifier
OSINDICA_00G00020
Transcript Identifier
OSINDICA_00G00020.1
Gene Type
Coding gene
Location
Scaffold019078 : 21-3366 : negative

Family

Gene family
HOM03M002082
(40 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
UPF0255 protein YPO3224/y0964/YP_0709
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameOsIFSC047350

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAInterPrometabolic process
GO:0006561IEAInterProproline biosynthetic process
GO:0045893IEAInterPropositive regulation of transcription, DNA-dependent
GO:0055114IEAInterProoxidation-reduction process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016987IEAInterProsigma factor activity
GO:0003723IEAInterProRNA binding
GO:0016491IEAInterProoxidoreductase activity
GO:0004349IEAInterProglutamate 5-kinase activity
GO:0004350IEAPLAZA Homologyglutamate-5-semialdehyde dehydrogenase activityHOM03M002082

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002478Pseudouridine synthase/archaeosine transglycosylase
IPR005715Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase
IPR015947PUA-like domain
IPR010520Protein of unknown function DUF1100, hydrolase-like
IPR001057Glutamate/acetylglutamate kinase
IPR001048Aspartate/glutamate/uridylate kinase
IPR009986Sigma factor-binding protein Crl
IPR016161Aldehyde/histidinol dehydrogenase
IPR019797Glutamate 5-kinase, conserved site
IPR016162Aldehyde dehydrogenase, N-terminal

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.