Gene: OSINDICA_00G00020 (Oryza sativa ssp. indica)
Overview 
- Gene Identifier
- OSINDICA_00G00020
- Transcript Identifier
- OSINDICA_00G00020.1
- Gene Type
- Coding gene
- Location
- Scaffold019078 : 21-3366 : negative
Family
- Gene family

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Descriptions
- Description (AnnoMine)
-
UPF0255 protein YPO3224/y0964/YP_0709
Description of best ortholog(s):

Identifiers
Identifier | Name |
---|---|
name | OsIFSC047350 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0008152 | IEA | InterPro | metabolic process | |
GO:0006561 | IEA | InterPro | proline biosynthetic process | |
GO:0045893 | IEA | InterPro | positive regulation of transcription, DNA-dependent | |
GO:0055114 | IEA | InterPro | oxidation-reduction process |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0016987 | IEA | InterPro | sigma factor activity | |
GO:0003723 | IEA | InterPro | RNA binding | |
GO:0016491 | IEA | InterPro | oxidoreductase activity | |
GO:0004349 | IEA | InterPro | glutamate 5-kinase activity | |
GO:0004350 | IEA | PLAZA Homology | glutamate-5-semialdehyde dehydrogenase activity | HOM03M002082 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005737 | IEA | InterPro | cytoplasm |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
InterPro | Description |
---|---|
IPR002478 | Pseudouridine synthase/archaeosine transglycosylase |
IPR005715 | Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase |
IPR015947 | PUA-like domain |
IPR010520 | Protein of unknown function DUF1100, hydrolase-like |
IPR001057 | Glutamate/acetylglutamate kinase |
IPR001048 | Aspartate/glutamate/uridylate kinase |
IPR009986 | Sigma factor-binding protein Crl |
IPR016161 | Aldehyde/histidinol dehydrogenase |
IPR019797 | Glutamate 5-kinase, conserved site |
IPR016162 | Aldehyde dehydrogenase, N-terminal |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.