PLAZA 3.0 Monocots gene overview : OS10G35110

Gene: OS10G35110 (Oryza sativa ssp. japonica)

Overview

Gene Identifier: OS10G35110
Transcript Identifier: OS10G35110.1
Gene Type: Coding gene
Location: 10 : 18733344-18740659 : positive

Family

Gene family: HOM03M000860
(81 genes in 15 species)
specific family
Subfamily: ORTHO03M012372
(4 genes in 4 species)
specific family
Duplication type: Tandem duplicate

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Descriptions

Description: alpha-galactosidase precursor, putative, expressed

Description: Alpha-galactosidase

Description (AnnoMine): Probable alpha-galactosidase D

Identifiers

Identifier	Name
transcript_id	LOC_OS10G35110.1
uniprot	Q9FXT4

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0016139	ISS	UniProt	glycoside catabolic process	1 2 3 4 5
GO:0046477	ISS	UniProt	glycosylceramide catabolic process	1 2 3 4 5
GO:0009311	ISS	UniProt	oligosaccharide metabolic process	1 2 3 4 5
GO:0005975	IEA	InterPro	carbohydrate metabolic process
GO:0009911	ISO	PLAZA Integrative Orthology	positive regulation of flower development	AT5G08370
GO:0009965	ISO	PLAZA Integrative Orthology	leaf morphogenesis	AT5G08370

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004557	ISS	UniProt	alpha-galactosidase activity	1 2 3 4 5
GO:0052692	IEA	UniProt	raffinose alpha-galactosidase activity	1 2 3 4 5
GO:0003824	IEA	InterPro	catalytic activity
GO:0004553	IEA	InterPro	hydrolase activity, hydrolyzing O-glycosyl compounds

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	ISS	UniProt	cytoplasm	1 2 3 4 5
GO:0009505	ISS	UniProt	plant-type cell wall	1 2 3 4 5

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR002241	Glycoside hydrolase, family 27
IPR017853	Glycoside hydrolase, superfamily
IPR000111	Glycoside hydrolase, clan GH-D
IPR013780	Glycosyl hydrolase, family 13, all-beta
IPR013785	Aldolase-type TIM barrel

Mapman id	Description
3.8.2	minor CHO metabolism.galactose.alpha-galactosidases

SignalP	Description
SignalP-noTM	Signal Peptide detected using noTM network