Gene: OS10G17570 (Oryza sativa ssp. japonica)

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Gene Identifier
OS10G17570
Transcript Identifier
OS10G17570.1
Gene Type
Transposon
Location
10 : 8863025-8866711 : positive

Family

No gene family defined for this gene.

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Descriptions

Description
retrotransposon protein, putative, unclassified, expressed

Identifiers

Identifier Name
transcript_idLOC_OS10G17570.1

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  • ...the colinearity of this gene with other genomes.
  • ...the local gene organization for homologous genes.
  • ...the phylogenetic tree of the homologous gene family.
  • ...the orthologs using the Integrative Orthology Viewer.
  • ...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006310RCAGene OntologyDNA recombinationGR_REF:8030
GO:0009401RCAGene Ontologyphosphoenolpyruvate-dependent sugar phosphotransferase systemGR_REF:8030
GO:0015074IEAInterProDNA integration

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677RCAGene OntologyDNA bindingGR_REF:8030
GO:0005351RCAGene Ontologysugar:hydrogen symporter activityGR_REF:8030
GO:0003676IEAInterPronucleic acid binding

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001584Integrase, catalytic core
IPR013103Reverse transcriptase, RNA-dependent DNA polymerase
IPR012337Ribonuclease H-like domain

Mapman id Description
30.2.17signalling.receptor kinases.DUF 26
No SignalP domains detected for this gene.