Gene: OS07G32170 (Oryza sativa ssp. japonica)
Overview 
- Gene Identifier
- OS07G32170
- Transcript Identifier
- OS07G32170.1
- Gene Type
- Coding gene
- Location
- 7 : 19100479-19103106 : negative
Family
- Gene family
- Subfamily
Descriptions
- Description
-
OsSPL13 - SBP-box gene family member, expressed
- Description
-
Squamosa promoter-binding-like protein 13
- Description (AnnoMine)
-
promoter-binding-like protein 13
Identifiers
Identifier | Name |
---|---|
transcript_id | LOC_OS07G32170.1 |
uniprot | Q6Z461 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0006355 | IEA | UniProt | regulation of transcription, DNA-dependent | 1 2 3 4 |
GO:0006351 | IEA | UniProt | transcription, DNA-templated | 1 2 3 4 |
GO:0009836 | ISO | PLAZA Integrative Orthology | fruit ripening, climacteric | SL02G077920 |
GO:0009829 | ISO | PLAZA Integrative Orthology | cell wall modification involved in fruit ripening | SL02G077920 |
GO:0009693 | ISO | PLAZA Integrative Orthology | ethylene biosynthetic process | SL02G077920 |
GO:0016117 | ISO | PLAZA Integrative Orthology | carotenoid biosynthetic process | SL02G077920 |
GO:0010321 | ISO | PLAZA Integrative Orthology | regulation of vegetative phase change | AT3G15270 AT2G33810 AT1G53160 |
GO:0009911 | ISO | PLAZA Integrative Orthology | positive regulation of flower development | AT2G33810 |
GO:0009908 | ISO | PLAZA Integrative Orthology | flower development | AT2G33810 |
GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT2G33810 |
GO:0010229 | ISO | PLAZA Integrative Orthology | inflorescence development | AT2G33810 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0003677 | IEA | UniProt | DNA binding | 1 2 3 4 |
GO:0046872 | IEA | UniProt | metal ion binding | 1 2 3 4 |
GO:0003700 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding transcription factor activity | AT2G33810 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005634 | IEA | UniProt | nucleus | 1 2 3 4 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
33.3 | development.squamosa promoter binding like (SPL) |
No SignalP domains detected for this gene.