Gene: OS06G48534 (Oryza sativa ssp. japonica)

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Gene Identifier
OS06G48534
Transcript Identifier
OS06G48534.1
Gene Type
Coding gene
Location
6 : 29366295-29370300 : negative

Family

Gene family
HOM03M000924
(76 genes in 15 species)
specific family
Subfamily
ORTHO03M001849
(9 genes in 7 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
GATA transcription factor 25, putative, expressed
Description (AnnoMine)
GATA transcription factor 28

Identifiers

Identifier Name
transcript_idLOC_OS06G48534.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0007623ISOPLAZA Integrative Orthologycircadian rhythmAT4G24470
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000924

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0043565IEAInterProsequence-specific DNA binding
GO:0003700IEAInterProsequence-specific DNA binding transcription factor activity
GO:0008270IEAInterProzinc ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT4G24470

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR010399Tify
IPR010402CCT domain
IPR000679Zinc finger, GATA-type
IPR013088Zinc finger, NHR/GATA-type

Mapman id Description
27.3.9RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBC2C2-GATA
PlantTFDBGATA