Gene: OS06G06900 (Oryza sativa ssp. japonica)

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Gene Identifier
OS06G06900
Transcript Identifier
OS06G06900.1
Gene Type
Coding gene
Location
6 : 3273487-3275912 : positive

Family

Gene family
HOM03M000047
(829 genes in 14 species)
specific family
Subfamily
ORTHO03M018230
(3 genes in 3 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
helix-loop-helix DNA-binding domain containing protein, expressed
Description (AnnoMine)
Transcription factor SPATULA

Identifiers

Identifier Name
transcript_idLOC_OS06G06900.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010047ISOPLAZA Integrative Orthologyfruit dehiscenceAT5G67110
GO:0007623ISOPLAZA Integrative Orthologycircadian rhythmAT4G36930
GO:0048440ISOPLAZA Integrative Orthologycarpel developmentAT4G36930
GO:0010154ISOPLAZA Integrative Orthologyfruit developmentAT4G36930
GO:0010187ISOPLAZA Integrative Orthologynegative regulation of seed germinationAT4G36930
GO:0010114ISOPLAZA Integrative Orthologyresponse to red lightAT4G36930
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT4G36930
GO:0006355ISOPLAZA Integrative Orthologyregulation of transcription, DNA-dependentAT4G28800 AT4G00050
GO:0009567ISOPLAZA Integrative Orthologydouble fertilization forming a zygote and endospermAT4G00050

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983IEAInterProprotein dimerization activity
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT4G36930
GO:0003700ISOPLAZA Integrative Orthologysequence-specific DNA binding transcription factor activityAT4G36930

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G67110 AT4G36930
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT4G00050

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBbHLH
PlantTFDBbHLH