Gene: OS05G51850 (Oryza sativa ssp. japonica)

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Gene Identifier
OS05G51850
Transcript Identifier
OS05G51850.1
Gene Type
Coding gene
Location
5 : 29759619-29761364 : negative

Family

Gene family
HOM03M009405
(6 genes in 6 species)
specific family

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Descriptions

Description
AT hook-containing DNA-binding protein, putative, expressed
Description (AnnoMine)
Histone H5

Identifiers

Identifier Name
transcript_idLOC_OS05G51850.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006334RCA, IEAGene Ontologynucleosome assemblyGR_REF:8030
GO:0006355RCA, IEAGene Ontologyregulation of transcription, DNA-dependentGR_REF:8030
GO:0051276RCAGene Ontologychromosome organizationGR_REF:8030
GO:0031497IEAPLAZA Homologychromatin assemblyHOM03M009405
GO:0034728IEAPLAZA Homologynucleosome organizationHOM03M009405
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M009405

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677RCA, IEAGene OntologyDNA bindingGR_REF:8030

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634RCA, IEAGene OntologynucleusGR_REF:8030
GO:0000786IEAInterPronucleosome
GO:0000785IEAInterProchromatin
GO:1990104IEAPLAZA HomologyDNA bending complexHOM03M009405

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR020478AT hook-like
IPR005818Linker histone H1/H5, domain H15
IPR017956AT hook, DNA-binding motif
IPR000116High mobility group, HMG-I/HMG-Y
IPR011991Winged helix-turn-helix DNA-binding domain

Mapman id Description
35.2not assigned.unknown
No SignalP domains detected for this gene.