Gene: OS05G38820 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
OS05G38820
Transcript Identifier
OS05G38820.4
Gene Type
Coding gene
Location
5 : 22773145-22773728 : negative

Family

Gene family
HOM03M000215
(230 genes in 16 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description
histone-like transcription factor and archaeal histone, putative, expressed
Description (AnnoMine)
transcription factor Y subunit B

Identifiers

Identifier Name
transcript_idLOC_OS05G38820.4

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT2G38880
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000215

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0043565IEAInterProsequence-specific DNA binding
GO:0046982IEAInterProprotein heterodimerization activity
GO:0003677IEAInterProDNA binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT2G38880
GO:0046983IEAPLAZA Homologyprotein dimerization activityHOM03M000215

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAInterProintracellular
GO:0005634IEAInterPronucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003957Transcription factor, NFYB/HAP3 subunit
IPR003956Transcription factor, NFYB/HAP3, conserved site
IPR009072Histone-fold
IPR003958Transcription factor CBF/NF-Y/archaeal histone

Mapman id Description
27.3.15RNA.regulation of transcription.CCAAT box binding factor family, HAP3
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBCCAAT
PlantTFDBNF-YB