Gene: OS05G38560 (Oryza sativa ssp. japonica)

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Gene Identifier
OS05G38560
Transcript Identifier
OS05G38560.1
Gene Type
Coding gene
Location
5 : 22625115-22625615 : positive

Family

Gene family
HOM03M000302
(183 genes in 16 species)
specific family
Subfamily
ORTHO03M028190
(2 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed
Description (AnnoMine)
Histone H2B

Identifiers

Identifier Name
transcript_idLOC_OS05G38560.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006334IEAInterPronucleosome assembly
GO:0071824IEAPLAZA Homologyprotein-DNA complex subunit organizationHOM03M000302
GO:0071822IEAPLAZA Homologyprotein complex subunit organizationHOM03M000302
GO:0006325IEAPLAZA Homologychromatin organizationHOM03M000302
GO:0006323IEAPLAZA HomologyDNA packagingHOM03M000302
GO:0070271IEAPLAZA Homologyprotein complex biogenesisHOM03M000302
GO:0043933IEAPLAZA Homologymacromolecular complex subunit organizationHOM03M000302
GO:0031497IEAPLAZA Homologychromatin assemblyHOM03M000302
GO:0006996IEAPLAZA Homologyorganelle organizationHOM03M000302
GO:0071103IEAPLAZA HomologyDNA conformation changeHOM03M000302
GO:0065003IEAPLAZA Homologymacromolecular complex assemblyHOM03M000302
GO:0065004IEAPLAZA Homologyprotein-DNA complex assemblyHOM03M000302
GO:0006333IEAPLAZA Homologychromatin assembly or disassemblyHOM03M000302
GO:0051276IEAPLAZA Homologychromosome organizationHOM03M000302
GO:0044085IEAPLAZA Homologycellular component biogenesisHOM03M000302
GO:0022607IEAPLAZA Homologycellular component assemblyHOM03M000302
GO:0034728IEAPLAZA Homologynucleosome organizationHOM03M000302
GO:0034622IEAPLAZA Homologycellular macromolecular complex assemblyHOM03M000302
GO:0006461IEAPLAZA Homologyprotein complex assemblyHOM03M000302

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046982IEAInterProprotein heterodimerization activity
GO:0003677IEAInterProDNA binding
GO:0046983IEAPLAZA Homologyprotein dimerization activityHOM03M000302

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0000786IEAInterPronucleosome
GO:0032993IEAPLAZA Homologyprotein-DNA complexHOM03M000302
GO:1990104IEAPLAZA HomologyDNA bending complexHOM03M000302
GO:0000785IEAPLAZA HomologychromatinHOM03M000302
GO:0044815IEAPLAZA HomologyDNA packaging complexHOM03M000302
GO:0005694IEAPLAZA HomologychromosomeHOM03M000302
GO:0044427IEAPLAZA Homologychromosomal partHOM03M000302

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000558Histone H2B
IPR009072Histone-fold
IPR007125Histone core

Mapman id Description
28.1.3DNA.synthesis/chromatin structure.histone
No SignalP domains detected for this gene.