Gene: OS04G54810 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
OS04G54810
Transcript Identifier
OS04G54810.1
Gene Type
Coding gene
Location
4 : 32589470-32595726 : negative

Family

Gene family
HOM03M000389
(156 genes in 14 species)
specific family
Subfamily
ORTHO03M000293
(17 genes in 8 species)
specific family

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Descriptions

Description
beta-D-xylosidase, putative, expressed
Description (AnnoMine)
xylosidase/alpha-L-arabinofuranosidase 2

Identifiers

Identifier Name
transcript_idLOC_OS04G54810.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAInterProcarbohydrate metabolic process
GO:0031222ISOPLAZA Integrative Orthologyarabinan catabolic processAT5G09730
GO:0045493ISOPLAZA Integrative Orthologyxylan catabolic processAT5G64570

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004553IEAInterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0046556ISOPLAZA Integrative Orthologyalpha-N-arabinofuranosidase activityAT5G09730
GO:0009044ISOPLAZA Integrative Orthologyxylan 1,4-beta-xylosidase activityAT5G64570

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016023RCAGene Ontologycytoplasmic membrane-bounded vesicleGR_REF:7047
GO:0005618ISOPLAZA Integrative Orthologycell wallAT5G64570
GO:0048046ISOPLAZA Integrative OrthologyapoplastAT5G64570

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR026891Fibronectin type III-like domain
IPR001764Glycoside hydrolase, family 3, N-terminal
IPR002772Glycoside hydrolase family 3 C-terminal domain
IPR026892Glycoside hydrolase family 3
IPR017853Glycoside hydrolase, superfamily

Mapman id Description
10.6.2cell wall.degradation.mannan-xylose-arabinose-fucose
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network