Gene: OS04G53540 (Oryza sativa ssp. japonica)

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Gene Identifier
OS04G53540
Transcript Identifier
OS04G53540.1
Gene Type
Coding gene
Location
4 : 31900823-31906584 : negative

Family

Gene family
HOM03M000193
(259 genes in 14 species)
specific family
Subfamily
ORTHO03M000034
(55 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
homeobox and START domains containing protein, putative, expressed
Description
Homeobox-leucine zipper protein ROC2
Description (AnnoMine)
zipper protein PROTODERMAL FACTOR 2

Identifiers

Identifier Name
transcript_idLOC_OS04G53540.1
uniprotQ0J9X2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351IEAUniProttranscription, DNA-templated1 2 3
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0010090ISOPLAZA Integrative Orthologytrichome morphogenesisAT1G05230
GO:0048497ISOPLAZA Integrative Orthologymaintenance of floral organ identityAT1G05230
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000193

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008289IEAUniProtlipid binding1 2 3
GO:0043565IEAUniProtsequence-specific DNA binding1 2 3
GO:0003700IEAUniProtsequence-specific DNA binding transcription factor activity1 2 3
GO:0003677IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAUniProtnucleus1 2 3

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001356Homeobox domain
IPR017970Homeobox, conserved site
IPR009057Homeodomain-like
IPR023393START-like domain
IPR002913START domain

Mapman id Description
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBHB
PlantTFDBHD-ZIP