Gene: OS04G40850 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
OS04G40850
Transcript Identifier
OS04G40850.1
Gene Type
Coding gene
Location
4 : 24241047-24243483 : positive

Family

Gene family
HOM03M002824
(31 genes in 16 species)
specific family
Subfamily
ORTHO03M001070
(11 genes in 11 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
26S proteasome non-ATPase regulatory subunit 6, putative, expressed
Description
26S proteasome non-ATPase regulatory subunit 6
Description (AnnoMine)
ATPase regulatory subunit 6

Identifiers

Identifier Name
transcript_idLOC_OS04G40850.1
uniprotQ8W425

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0030163ISOPLAZA Integrative Orthologyprotein catabolic processAT4G24820
GO:0006511ISOPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT4G24820

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000502IEAUniProtproteasome complex1
GO:0005829ISOPLAZA Integrative OrthologycytosolAT4G24820
GO:0016020ISOPLAZA Integrative OrthologymembraneAT4G24820
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT4G24820
GO:0005634ISOPLAZA Integrative OrthologynucleusAT4G24820

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR01958526S proteasome, regulatory subunit Rpn7
IPR011991Winged helix-turn-helix DNA-binding domain
IPR000717Proteasome component (PCI) domain

Mapman id Description
29.5.11.20protein.degradation.ubiquitin.proteasom
No SignalP domains detected for this gene.