PLAZA 3.0 Monocots gene overview : OS03G17570

Gene: OS03G17570 (Oryza sativa ssp. japonica)

Overview

Gene Identifier: OS03G17570
Transcript Identifier: OS03G17570.1
Gene Type: Coding gene
Location: 3 : 9760098-9767719 : negative

Family

Gene family: HOM03M000944
(75 genes in 15 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: response regulator receiver domain containing protein, expressed

Description: Two-component response regulator-like PRR73

Description (AnnoMine): component response regulator-like PRR73

Identifiers

Identifier	Name
transcript_id	LOC_OS03G17570.1
uniprot	Q10N34

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0035556	IEA	UniProt	intracellular signal transduction	1 2 3 4 5
GO:0006355	IEA	UniProt	regulation of transcription, DNA-dependent	1 2 3 4 5
GO:0048511	IEA	UniProt	rhythmic process	1 2 3 4 5
GO:0006351	IEA	UniProt	transcription, DNA-templated	1 2 3 4 5
GO:0000160	IEA	InterPro	phosphorelay signal transduction system
GO:0045892	ISO	PLAZA Integrative Orthology	negative regulation of transcription, DNA-dependent	AT5G02810
GO:0009266	ISO	PLAZA Integrative Orthology	response to temperature stimulus	AT5G02810
GO:0010017	ISO	PLAZA Integrative Orthology	red or far-red light signaling pathway	AT5G02810
GO:0007623	ISO	PLAZA Integrative Orthology	circadian rhythm	AT5G02810
GO:2001141	IEA	PLAZA Homology	regulation of RNA biosynthetic process	HOM03M000944

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0000156	IEA	UniProt	phosphorelay response regulator activity	1 2 3 4 5
GO:0005515	IEA	InterPro	protein binding
GO:0003677	ISO	PLAZA Integrative Orthology	DNA binding	AT5G02810

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	IEA	UniProt	nucleus	1 2 3 4 5
GO:0005739	ISO	PLAZA Integrative Orthology	mitochondrion	AT5G02810

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001789	Signal transduction response regulator, receiver domain
IPR010402	CCT domain
IPR011006	CheY-like superfamily

Mapman id	Description
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family

No SignalP domains detected for this gene.

Database	Type
PlnTFDB	Orphans