Gene: OS03G07880 (Oryza sativa ssp. japonica)

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Gene Identifier
OS03G07880
Transcript Identifier
OS03G07880.1
Gene Type
Coding gene
Location
3 : 4002371-4005324 : negative

Family

Gene family
HOM03M000475
(132 genes in 15 species)
specific family
Subfamily
ORTHO03M002002
(9 genes in 6 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
nuclear transcription factor Y subunit, putative, expressed
Description (AnnoMine)
transcription factor Y subunit A

Identifiers

Identifier Name
transcript_idLOC_OS03G07880.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0045892ISOPLAZA Integrative Orthologynegative regulation of transcription, DNA-dependentAT3G20910
GO:0009555ISOPLAZA Integrative Orthologypollen developmentAT3G20910
GO:0009790ISOPLAZA Integrative Orthologyembryo developmentAT3G20910
GO:0010262ISOPLAZA Integrative Orthologysomatic embryogenesisAT3G20910
GO:0048316ISOPLAZA Integrative Orthologyseed developmentAT3G20910
GO:0055046ISOPLAZA Integrative OrthologymicrogametogenesisAT3G20910
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000475

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700IEAInterProsequence-specific DNA binding transcription factor activity
GO:0003677IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016023RCAGene Ontologycytoplasmic membrane-bounded vesicleGR_REF:7047
GO:0016602IEAInterProCCAAT-binding factor complex

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001289CCAAT-binding transcription factor, subunit B
IPR018362CCAAT-binding factor, conserved site

Mapman id Description
27.3.14RNA.regulation of transcription.CCAAT box binding factor family, HAP2
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBCCAAT