Gene: OS02G53140 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
OS02G53140
Transcript Identifier
OS02G53140.1
Gene Type
Coding gene
Location
2 : 32528425-32533319 : negative

Family

Gene family
HOM03M000659
(104 genes in 16 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description
COP1, putative, expressed
Description (AnnoMine)
protein ligase COP1

Identifiers

Identifier Name
transcript_idLOC_OS02G53140.1

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009641ISOPLAZA Integrative Orthologyshade avoidanceAT2G32950
GO:0009649ISOPLAZA Integrative Orthologyentrainment of circadian clockAT2G32950
GO:0006281ISOPLAZA Integrative OrthologyDNA repairAT2G32950
GO:0048573ISOPLAZA Integrative Orthologyphotoperiodism, floweringAT2G32950
GO:0046283ISOPLAZA Integrative Orthologyanthocyanin-containing compound metabolic processAT2G32950
GO:0010119ISOPLAZA Integrative Orthologyregulation of stomatal movementAT2G32950
GO:0009647ISOPLAZA Integrative OrthologyskotomorphogenesisAT2G32950
GO:0009640ISOPLAZA Integrative OrthologyphotomorphogenesisAT2G32950

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT2G32950
GO:0043167IEAPLAZA Homologyion bindingHOM03M000659

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016604ISOPLAZA Integrative Orthologynuclear bodyAT2G32950
GO:0000152ISOPLAZA Integrative Orthologynuclear ubiquitin ligase complexAT2G32950
GO:0005634ISOPLAZA Integrative OrthologynucleusAT2G32950

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001841Zinc finger, RING-type
IPR017986WD40-repeat-containing domain
IPR001680WD40 repeat
IPR015943WD40/YVTN repeat-like-containing domain
IPR017907Zinc finger, RING-type, conserved site
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR019775WD40 repeat, conserved site

Mapman id Description
33.99development.unspecified
No SignalP domains detected for this gene.