PLAZA 3.0 Monocots gene overview : OS02G47970

Gene: OS02G47970 (Oryza sativa ssp. japonica)

Overview

Gene Identifier: OS02G47970
Transcript Identifier: OS02G47970.1
Gene Type: Coding gene
Location: 2 : 29343049-29357076 : positive

Family

Gene family: HOM03M003492
(26 genes in 16 species)
specific family

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Descriptions

Description: calpain, putative, expressed

Description: Calpain-type cysteine protease ADL1

Description (AnnoMine): Calpain-type cysteine protease DEK1

Identifiers

Identifier	Name
transcript_id	LOC_OS02G47970.1
uniprot	Q6ZFZ4

Toolbox

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...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0009793	ISS	UniProt	embryo development ending in seed dormancy	1 2 3 4 5
GO:0009957	ISS	UniProt	epidermal cell fate specification	1 2 3 4 5
GO:2000011	IMP	UniProt	regulation of adaxial/abaxial pattern formation	1 2 3 4 5
GO:0001558	ISS	UniProt	regulation of cell growth	1 2 3 4 5
GO:0042127	ISS	UniProt	regulation of cell proliferation	1 2 3 4 5
GO:2000014	ISS	UniProt	regulation of endosperm development	1 2 3 4 5
GO:2000024	IMP	UniProt	regulation of leaf development	1 2 3 4 5
GO:0009934	IMP	UniProt	regulation of meristem structural organization	1 2 3 4 5
GO:0097264	ISS	UniProt	self proteolysis	1 2 3 4 5
GO:0006508	IEA	InterPro	proteolysis
GO:0090392	ISO	PLAZA Integrative Orthology	sepal giant cell differentiation	AT1G55350
GO:0032877	ISO	PLAZA Integrative Orthology	positive regulation of DNA endoreduplication	AT1G55350
GO:0040014	ISO	PLAZA Integrative Orthology	regulation of multicellular organism growth	AT1G55350
GO:0009960	ISO	PLAZA Integrative Orthology	endosperm development	AT1G55350
GO:0001708	ISO	PLAZA Integrative Orthology	cell fate specification	AT1G55350

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004198	IEA	UniProt	calcium-dependent cysteine-type endopeptidase activity	1 2 3 4 5
GO:0008234	ISS	UniProt	cysteine-type peptidase activity	1 2 3 4 5
GO:0004197	ISO	PLAZA Integrative Orthology	cysteine-type endopeptidase activity	AT1G55350

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016020	RCA	Gene Ontology	membrane	GR_REF:8210
GO:0005789	ISS	UniProt	endoplasmic reticulum membrane	1 2 3 4 5
GO:0010008	ISS	UniProt	endosome membrane	1 2 3 4 5
GO:0005887	ISS	UniProt	integral to plasma membrane	1 2 3 4 5
GO:0005622	IEA	InterPro	intracellular
GO:0005783	ISO	PLAZA Integrative Orthology	endoplasmic reticulum	AT1G55350
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT1G55350
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT1G55350

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR022684	Peptidase C2, calpain family
IPR022682	Peptidase C2, calpain, large subunit, domain III
IPR001300	Peptidase C2, calpain, catalytic domain
IPR000169	Cysteine peptidase, cysteine active site
IPR008985	Concanavalin A-like lectin/glucanases superfamily
IPR013320	Concanavalin A-like lectin/glucanase, subgroup
IPR022683	Peptidase C2, calpain, domain III

Mapman id	Description
29.5.3	protein.degradation.cysteine protease

No SignalP domains detected for this gene.