Gene: OS02G39890 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
OS02G39890
Transcript Identifier
OS02G39890.1
Gene Type
Coding gene
Location
2 : 24100438-24103298 : negative

Family

Gene family
HOM03M003679
(24 genes in 16 species)
specific family

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Descriptions

Description
RNA recognition motif containing protein, putative, expressed
Description
Nuclear cap-binding protein subunit 2
Description (AnnoMine)
cap-binding protein subunit 2

Identifiers

Identifier Name
transcript_idLOC_OS02G39890.1
uniprotQ84L14

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006370IEAUniProt7-methylguanosine mRNA capping1 2 3
GO:0031047IEAUniProtgene silencing by RNA1 2 3
GO:0045292IEAUniProtmRNA cis splicing, via spliceosome1 2 3
GO:0031053ISOPLAZA Integrative Orthologyprimary miRNA processingAT5G44200
GO:0000394ISOPLAZA Integrative OrthologyRNA splicing, via endonucleolytic cleavage and ligationAT5G44200
GO:0016070ISOPLAZA Integrative OrthologyRNA metabolic processAT5G44200

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAUniProtnucleotide binding1 2 3
GO:0000339IEAUniProtRNA cap binding1 2 3
GO:0003676IEAInterPronucleic acid binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G44200
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03M003679

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAUniProtcytoplasm1 2 3
GO:0005846IEAUniProtnuclear cap binding complex1 2 3
GO:0005634IEAUniProtnucleus1 2 3
GO:0005845ISOPLAZA Integrative OrthologymRNA cap binding complexAT5G44200

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000504RNA recognition motif domain
IPR012677Nucleotide-binding, alpha-beta plait
IPR027157Nuclear cap-binding protein subunit 2

Mapman id Description
27.1.1RNA.processing.splicing
No SignalP domains detected for this gene.