Gene: OS01G16414 (Oryza sativa ssp. japonica)
Overview 
- Gene Identifier
- OS01G16414
- Transcript Identifier
- OS01G16414.1
- Gene Type
- Coding gene
- Location
- 1 : 9319356-9321526 : negative
Family
- Gene family
Descriptions
- Description
-
actin, putative, expressed
- Description
-
Actin-related protein 6
- Description (AnnoMine)
-
Actin-related protein 6
Identifiers
Identifier | Name |
---|---|
transcript_id | LOC_OS01G16414.1 |
uniprot | Q5NBI2 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0016568 | IEA | UniProt | chromatin modification | 1 2 3 4 5 6 |
GO:0006952 | IEA | UniProt | defense response | 1 2 3 4 5 6 |
GO:0007275 | IEA | UniProt | multicellular organismal development | 1 2 3 4 5 6 |
GO:0009266 | ISO | PLAZA Integrative Orthology | response to temperature stimulus | AT3G33520 |
GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-dependent | AT3G33520 |
GO:0006338 | ISO | PLAZA Integrative Orthology | chromatin remodeling | AT3G33520 |
GO:0009910 | ISO | PLAZA Integrative Orthology | negative regulation of flower development | AT3G33520 |
GO:0008283 | ISO | PLAZA Integrative Orthology | cell proliferation | AT3G33520 |
GO:0030029 | ISO | PLAZA Integrative Orthology | actin filament-based process | AT3G33520 |
GO:0006996 | IEA | PLAZA Homology | organelle organization | HOM03M000164 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G33520 |
GO:0005524 | IEA | PLAZA Homology | ATP binding | HOM03M000164 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005737 | IEA | UniProt | cytoplasm | 1 2 3 4 5 6 |
GO:0005856 | IEA | UniProt | cytoskeleton | 1 2 3 4 5 6 |
GO:0005634 | IEA | UniProt | nucleus | 1 2 3 4 5 6 |
GO:0044446 | IEA | PLAZA Homology | intracellular organelle part | HOM03M000164 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
31.1 | cell.organisation |
No SignalP domains detected for this gene.