Gene: OS01G11920 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
OS01G11920
Transcript Identifier
OS01G11920.1
Gene Type
Transposon
Location
1 : 6472032-6485507 : positive

Family

No gene family defined for this gene.

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Descriptions

Description
retrotransposon protein, putative, unclassified, expressed

Identifiers

Identifier Name
transcript_idLOC_OS01G11920.1

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  • ...the colinearity of this gene with other genomes.
  • ...the local gene organization for homologous genes.
  • ...the phylogenetic tree of the homologous gene family.
  • ...the orthologs using the Integrative Orthology Viewer.
  • ...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0045454IEAInterProcell redox homeostasis
GO:0006278IEAInterProRNA-dependent DNA replication

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0003723IEAInterProRNA binding
GO:0003964IEAInterProRNA-directed DNA polymerase activity
GO:0008270IEAInterProzinc ion binding
GO:0003676IEAInterPronucleic acid binding

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005135Endonuclease/exonuclease/phosphatase
IPR013026Tetratricopeptide repeat-containing domain
IPR019734Tetratricopeptide repeat
IPR012336Thioredoxin-like fold
IPR025558Domain of unknown function DUF4283
IPR000477Reverse transcriptase
IPR025836Zinc knuckle CX2CX4HX4C
IPR011990Tetratricopeptide-like helical
IPR001878Zinc finger, CCHC-type
IPR026960Reverse transcriptase zinc-binding domain
IPR012337Ribonuclease H-like domain
IPR013766Thioredoxin domain

Mapman id Description
21.1redox.thioredoxin
No SignalP domains detected for this gene.