PLAZA 3.0 Monocots gene overview : OS01G08880

Gene: OS01G08880 (Oryza sativa ssp. japonica)

Overview

Gene Identifier: OS01G08880
Transcript Identifier: OS01G08880.1
Gene Type: Coding gene
Location: 1 : 4454755-4457084 : negative

Family

Gene family: HOM03M001740
(45 genes in 13 species)
specific family

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Descriptions

Description (AnnoMine): metalloprotease FTSH

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
transcript_id	LOC_OS01G08880.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006625	IEA	InterPro	protein targeting to peroxisome
GO:0009658	IEA	PLAZA Homology	chloroplast organization	HOM03M001740

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0042623	IEA	InterPro	ATPase activity, coupled
GO:0005524	IEA	InterPro	ATP binding
GO:0004693	IEA	PLAZA Homology	cyclin-dependent protein serine/threonine kinase activity	HOM03M001740
GO:0097472	IEA	PLAZA Homology	cyclin-dependent protein kinase activity	HOM03M001740

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005739	RCA	Gene Ontology	mitochondrion	GR_REF:7047
GO:0005778	IEA	InterPro	peroxisomal membrane

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR025653	Peroxisome biogenesis factor 1
IPR014939	CDT1 Geminin-binding domain-like

Mapman id	Description
35.2	not assigned.unknown

No SignalP domains detected for this gene.