Gene: MA08G05240 (Musa acuminata)

Overview top

Gene Identifier
MA08G05240
Transcript Identifier
MA08G05240.1
Gene Type
Coding gene
Location
chr8 : 3347034-3348646 : positive

Family

Gene family
HOM03M000110
(422 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
CC_gene:HOX27,CC_gene:HOX11,CC_gene:HAT14,CC_gene:HAT22,CC_gene:HOX19,CC_functional_completeness:complete,PRODUCT:Whole genome shotgun sequence of line PN40024%2C scaffold_732.assembly12x (Fragment),GO:0043565,GO:0030528,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number
Description (AnnoMine)
Homeobox-leucine zipper protein

Identifiers

Identifier Name
GeneNameGSMUA_Achr8G05100_001
pidGSMUA_Achr8P05100_001
idGSMUA_Achr8T05100_001
tidGSMUA_Achr8T05100_001

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03M000110
GO:0010467IEAPLAZA Homologygene expressionHOM03M000110
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03M000110
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03M000110
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03M000110
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03M000110
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03M000110
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03M000110
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03M000110
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03M000110
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03M000110
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03M000110
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03M000110
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03M000110
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03M000110
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03M000110
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03M000110
GO:0065007IEAPLAZA Homologybiological regulationHOM03M000110
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03M000110
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03M000110
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03M000110
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03M000110
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03M000110
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03M000110
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03M000110
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000110
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03M000110
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03M000110
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03M000110
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03M000110
GO:0006351IEAPLAZA Homologytranscription, DNA-templatedHOM03M000110
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03M000110
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03M000110
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03M000110
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03M000110
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03M000110
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03M000110
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03M000110

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0043565IEAInterProsequence-specific DNA binding
GO:0003700IEAInterProsequence-specific DNA binding transcription factor activity
GO:0003677IEAInterProDNA binding
GO:0044212IEAPLAZA Homologytranscription regulatory region DNA bindingHOM03M000110
GO:0001067IEAPLAZA Homologyregulatory region nucleic acid bindingHOM03M000110
GO:0000975IEAPLAZA Homologyregulatory region DNA bindingHOM03M000110
GO:0000976IEAPLAZA Homologytranscription regulatory region sequence-specific DNA bindingHOM03M000110
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03M000110
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03M000110

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0043231IEAPLAZA Homologyintracellular membrane-bounded organelleHOM03M000110
GO:0005622IEAPLAZA HomologyintracellularHOM03M000110
GO:0043226IEAPLAZA HomologyorganelleHOM03M000110
GO:0043227IEAPLAZA Homologymembrane-bounded organelleHOM03M000110
GO:0043229IEAPLAZA Homologyintracellular organelleHOM03M000110
GO:0044424IEAPLAZA Homologyintracellular partHOM03M000110

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001356Homeobox domain
IPR017970Homeobox, conserved site
IPR003106Leucine zipper, homeobox-associated
IPR009057Homeodomain-like

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.