Gene: MA07G05550 (Musa acuminata)

Overview top

Gene Identifier
MA07G05550
Transcript Identifier
MA07G05550.1
Gene Type
Coding gene
Location
chr7 : 3997434-4002929 : positive

Family

Gene family
HOM03M003314
(27 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
CC_gene:mutM,CC_functional_completeness:modules,PRODUCT:Putative Formamidopyrimidine-DNA glycosylase,GO:0008534,GO:0008270,GO:0006289,GO:0006284,GO:0006281,GO:0003906,GO:0003684,GO:0003676,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:4.2.99.18
Description (AnnoMine)
Formamidopyrimidine-DNA glycosylase

Identifiers

Identifier Name
GeneNameGSMUA_Achr7G05390_001
pidGSMUA_Achr7P05390_001
idGSMUA_Achr7T05390_001
tidGSMUA_Achr7T05390_001

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281IEAInterProDNA repair
GO:0006284IEAInterProbase-excision repair
GO:0006289IEAInterPronucleotide-excision repair
GO:0006979ISOPLAZA Integrative Orthologyresponse to oxidative stressAT1G52500

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003906IEAInterProDNA-(apurinic or apyrimidinic site) lyase activity
GO:0003684IEAInterProdamaged DNA binding
GO:0008534IEAInterProoxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0008270IEAInterProzinc ion binding
GO:0003676IEAInterPronucleic acid binding
GO:0016799IEAInterProhydrolase activity, hydrolyzing N-glycosyl compounds
GO:0019104ISOPLAZA Integrative OrthologyDNA N-glycosylase activityAT1G52500
GO:0000702IEAPLAZA Homologyoxidized base lesion DNA N-glycosylase activityHOM03M003314

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012319DNA glycosylase/AP lyase, catalytic domain
IPR010979Ribosomal protein S13-like, H2TH
IPR000191DNA glycosylase/AP lyase
IPR015886DNA glycosylase/AP lyase, H2TH DNA-binding

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.