Gene: MA05G19060 (Musa acuminata)

Overview top

Gene Identifier
MA05G19060
Transcript Identifier
MA05G19060.1
Gene Type
Coding gene
Location
chr5 : 20013487-20017406 : negative

Family

Gene family
HOM03M000112
(417 genes in 15 species)
specific family
Subfamily
ORTHO03M001910
(9 genes in 8 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
CC_gene:ARF17,CC_gene:ARF10,CC_gene:ARF16,CC_gene:ARF8,CC_gene:ARF22,CC_gene:ARF18,CC_functional_completeness:complete,PRODUCT:Auxin response factor 18,GO:0046983,GO:0009725,GO:0005634,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number
Description (AnnoMine)
Auxin response factor

Identifiers

Identifier Name
GeneNameGSMUA_Achr5G18540_001
pidGSMUA_Achr5P18540_001
idGSMUA_Achr5T18540_001
tidGSMUA_Achr5T18540_001

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0009725IEAInterProresponse to hormone
GO:0048589ISOPLAZA Integrative Orthologydevelopmental growthAT2G28350
GO:0048442ISOPLAZA Integrative Orthologysepal developmentAT2G28350
GO:0048441ISOPLAZA Integrative Orthologypetal developmentAT2G28350
GO:0048366ISOPLAZA Integrative Orthologyleaf developmentAT2G28350
GO:0031540ISOPLAZA Integrative Orthologyregulation of anthocyanin biosynthetic processAT2G28350
GO:0010154ISOPLAZA Integrative Orthologyfruit developmentAT2G28350
GO:0009743ISOPLAZA Integrative Orthologyresponse to carbohydrateAT2G28350
GO:0009738ISOPLAZA Integrative Orthologyabscisic acid-activated signaling pathwayAT2G28350
GO:0009734ISOPLAZA Integrative Orthologyauxin mediated signaling pathwayAT2G28350
GO:0051301ISOPLAZA Integrative Orthologycell divisionAT2G28350
GO:0048829ISOPLAZA Integrative Orthologyroot cap developmentAT2G28350
GO:0007389ISOPLAZA Integrative Orthologypattern specification processAT2G28350
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03M000112
GO:0010467IEAPLAZA Homologygene expressionHOM03M000112
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03M000112
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03M000112
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03M000112
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03M000112
GO:0042221IEAPLAZA Homologyresponse to chemicalHOM03M000112
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03M000112
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03M000112
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03M000112
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03M000112
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03M000112
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03M000112
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03M000112
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03M000112
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03M000112
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03M000112
GO:0065007IEAPLAZA Homologybiological regulationHOM03M000112
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03M000112
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03M000112
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03M000112
GO:0009719IEAPLAZA Homologyresponse to endogenous stimulusHOM03M000112
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03M000112
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03M000112
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03M000112
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03M000112
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000112
GO:0010033IEAPLAZA Homologyresponse to organic substanceHOM03M000112
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03M000112
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03M000112
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03M000112
GO:0006351IEAPLAZA Homologytranscription, DNA-templatedHOM03M000112
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03M000112
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03M000112
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03M000112
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03M000112
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03M000112
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03M000112
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03M000112
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03M000112
GO:0050896IEAPLAZA Homologyresponse to stimulusHOM03M000112

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983IEAInterProprotein dimerization activity
GO:0003677IEAInterProDNA binding
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03M000112

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0043231IEAPLAZA Homologyintracellular membrane-bounded organelleHOM03M000112
GO:0043226IEAPLAZA HomologyorganelleHOM03M000112
GO:0043227IEAPLAZA Homologymembrane-bounded organelleHOM03M000112
GO:0043229IEAPLAZA Homologyintracellular organelleHOM03M000112

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003311AUX/IAA protein
IPR003340B3 DNA binding domain
IPR015300DNA-binding pseudobarrel domain
IPR011525Aux/IAA-ARF-dimerisation
IPR010525Auxin response factor

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.