Gene: MA04G23500 (Musa acuminata)

Overview top

Gene Identifier
MA04G23500
Transcript Identifier
MA04G23500.1
Gene Type
Coding gene
Location
chr4 : 23116607-23130488 : negative

Family

Gene family
HOM03M000391
(156 genes in 16 species)
specific family
Subfamily
ORTHO03M010194
(4 genes in 3 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description
CC_gene:CUL3A,CC_gene:culC,CC_gene:culD,CC_gene:Cul4a,CC_gene:CUL4A,CC_gene:CUL4B,CC_gene:Cul4b,CC_gene:CUL4,CC_functional_completeness:complete,PRODUCT:Cullin-4,GO:0031625,GO:0031461,GO:0006511,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number
Description (AnnoMine)
Cullin-3

Identifiers

Identifier Name
GeneNameGSMUA_Achr4G22850_001
pidGSMUA_Achr4P22850_001
idGSMUA_Achr4T22850_001
tidGSMUA_Achr4T22850_001

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511IEAInterProubiquitin-dependent protein catabolic process
GO:0048575ISOPLAZA Integrative Orthologyshort-day photoperiodism, floweringAT5G46210
GO:0006281ISOPLAZA Integrative OrthologyDNA repairAT5G46210
GO:0048825ISOPLAZA Integrative Orthologycotyledon developmentAT5G46210
GO:0010182ISOPLAZA Integrative Orthologysugar mediated signaling pathwayAT5G46210
GO:0010154ISOPLAZA Integrative Orthologyfruit developmentAT5G46210
GO:0009755ISOPLAZA Integrative Orthologyhormone-mediated signaling pathwayAT5G46210
GO:0048367ISOPLAZA Integrative Orthologyshoot system developmentAT5G46210
GO:0010100ISOPLAZA Integrative Orthologynegative regulation of photomorphogenesisAT5G46210
GO:0009908ISOPLAZA Integrative Orthologyflower developmentAT5G46210
GO:0000209ISOPLAZA Integrative Orthologyprotein polyubiquitinationAT5G46210
GO:0048366ISOPLAZA Integrative Orthologyleaf developmentAT5G46210
GO:0009640ISOPLAZA Integrative OrthologyphotomorphogenesisAT5G46210
GO:0044265IEAPLAZA Homologycellular macromolecule catabolic processHOM03M000391
GO:0030163IEAPLAZA Homologyprotein catabolic processHOM03M000391
GO:0051603IEAPLAZA Homologyproteolysis involved in cellular protein catabolic processHOM03M000391
GO:0019941IEAPLAZA Homologymodification-dependent protein catabolic processHOM03M000391
GO:0044257IEAPLAZA Homologycellular protein catabolic processHOM03M000391
GO:0043632IEAPLAZA Homologymodification-dependent macromolecule catabolic processHOM03M000391

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0031625IEAInterProubiquitin protein ligase binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G46210
GO:0044389IEAPLAZA Homologysmall conjugating protein ligase bindingHOM03M000391
GO:0019899IEAPLAZA Homologyenzyme bindingHOM03M000391

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0031461IEAInterProcullin-RING ubiquitin ligase complex
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G46210
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G46210
GO:0000151ISOPLAZA Integrative Orthologyubiquitin ligase complexAT5G46210
GO:0080008ISOPLAZA Integrative OrthologyCul4-RING ubiquitin ligase complexAT5G46210

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR019559Cullin protein, neddylation domain
IPR016157Cullin, conserved site
IPR016159Cullin repeat-like-containing domain
IPR016158Cullin homology
IPR011991Winged helix-turn-helix DNA-binding domain
IPR001373Cullin, N-terminal

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.