Gene: MA04G21960 (Musa acuminata)

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Gene Identifier
MA04G21960
Transcript Identifier
MA04G21960.1
Gene Type
Coding gene
Location
chr4 : 21837925-21847150 : negative

Family

Gene family
HOM03M001027
(71 genes in 16 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
CC_gene:Rat1,CC_gene:Xrn2,CC_gene:XRN2,CC_gene:XRN3,CC_gene:XRN4,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0008270,GO:0005622,GO:0004527,GO:0003676,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number
Description (AnnoMine)
5'-3' exoribonuclease 2

Identifiers

Identifier Name
GeneNameGSMUA_Achr4G21340_001
pidGSMUA_Achr4P21340_001
idGSMUA_Achr4T21340_001
tidGSMUA_Achr4T21340_001

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010587ISOPLAZA Integrative OrthologymiRNA catabolic processAT1G54490
GO:0040029ISOPLAZA Integrative Orthologyregulation of gene expression, epigeneticAT1G54490
GO:0031087ISOPLAZA Integrative Orthologydeadenylation-independent decapping of nuclear-transcribed mRNAAT1G54490
GO:0000291ISOPLAZA Integrative Orthologynuclear-transcribed mRNA catabolic process, exonucleolyticAT1G54490
GO:0009826ISOPLAZA Integrative Orthologyunidimensional cell growthAT1G54490
GO:0009961ISOPLAZA Integrative Orthologyresponse to 1-aminocyclopropane-1-carboxylic acidAT1G54490
GO:0009873ISOPLAZA Integrative Orthologyethylene mediated signaling pathwayAT1G54490
GO:0009723ISOPLAZA Integrative Orthologyresponse to ethyleneAT1G54490
GO:0009630ISOPLAZA Integrative OrthologygravitropismAT1G54490

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004527IEAInterProexonuclease activity
GO:0008270IEAInterProzinc ion binding
GO:0003676IEAInterPronucleic acid binding
GO:0004534ISOPLAZA Integrative Orthology5'-3' exoribonuclease activityAT1G54490

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAInterProintracellular
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G54490
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G54490

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001878Zinc finger, CCHC-type
IPR004859Putative 5-3 exonuclease
IPR0270735'-3' exoribonuclease

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.