PLAZA 3.0 Monocots gene overview : MA01G08730

Gene: MA01G08730 (Musa acuminata)

Overview

Gene Identifier: MA01G08730
Transcript Identifier: MA01G08730.1
Gene Type: Coding gene
Location: chr1 : 6481113-6481877 : negative

Family

Gene family: HOM03M000136
(344 genes in 15 species)
specific family
Subfamily: ORTHO03M001394
(10 genes in 7 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: CC_gene:SPL6,CC_gene:LG1,CC_gene:SBP1,CC_gene:SPL12,CC_gene:SBP2,CC_gene:SPL5,CC_gene:SPL4,CC_gene:SPL13,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0005634,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number

Description (AnnoMine): promoter-binding-like protein

Identifiers

Identifier	Name
GeneName	GSMUA_Achr1G08440_001
pid	GSMUA_Achr1P08440_001
id	GSMUA_Achr1T08440_001
tid	GSMUA_Achr1T08440_001

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0010321	ISO	PLAZA Integrative Orthology	regulation of vegetative phase change	AT3G15270
GO:0006355	ISO	PLAZA Integrative Orthology	regulation of transcription, DNA-dependent	AT3G15270

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003677	IEA	InterPro	DNA binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	IEA	InterPro	nucleus

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR004333	Transcription factor, SBP-box

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.

Database	Type
PlantTFDB	SBP