Gene: MA00G22060 (Musa acuminata)

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Gene Identifier
MA00G22060
Transcript Identifier
MA00G22060.1
Gene Type
Coding gene
Location
chrUn_random : 103596148-103606558 : negative

Family

Gene family
HOM03M002094
(39 genes in 15 species)
specific family

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Descriptions

Description
CC_gene:Uhrf1,CC_gene:ORTHL,CC_gene:ORTH3,CC_gene:ORTH5,CC_gene:ORTH4,CC_gene:ORTH1,CC_gene:ORTH2,CC_functional_completeness:complete,PRODUCT:E3 ubiquitin-protein ligase ORTHRUS 2,GO:0008270,GO:0005515,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number
Description (AnnoMine)
Putative E3 ubiquitin-protein ligase ORTHRUS 4

Identifiers

Identifier Name
GeneNameGSMUA_AchrUn_randomG21240_001
pidGSMUA_AchrUn_randomP21240_001
idGSMUA_AchrUn_randomT21240_001
tidGSMUA_AchrUn_randomT21240_001

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0031508ISOPLAZA Integrative Orthologycentromeric heterochromatin assemblyAT1G57820
GO:0032776ISOPLAZA Integrative OrthologyDNA methylation on cytosineAT1G57820 AT1G66050 AT5G39550
GO:0006325ISOPLAZA Integrative Orthologychromatin organizationAT1G57820
GO:0051301ISOPLAZA Integrative Orthologycell divisionAT1G57820
GO:0016567ISOPLAZA Integrative Orthologyprotein ubiquitinationAT1G57820 AT1G66050 AT4G08590 AT5G39550
GO:0010424ISOPLAZA Integrative OrthologyDNA methylation on cytosine within a CG sequenceAT1G57820 AT5G39550
GO:0090309ISOPLAZA Integrative Orthologypositive regulation of methylation-dependent chromatin silencingAT1G57820 AT1G66040 AT1G66050 AT5G39550
GO:0010228ISOPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT5G39550

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0042393IEAInterProhistone binding
GO:0008270IEAInterProzinc ion binding
GO:0046872IEAInterPrometal ion binding
GO:0008327ISOPLAZA Integrative Orthologymethyl-CpG bindingAT1G57820 AT5G39550
GO:0010428ISOPLAZA Integrative Orthologymethyl-CpNpG bindingAT1G57820 AT5G39550
GO:0010429ISOPLAZA Integrative Orthologymethyl-CpNpN bindingAT1G57820 AT5G39550
GO:0003682ISOPLAZA Integrative Orthologychromatin bindingAT1G57820
GO:0010385ISOPLAZA Integrative Orthologydouble-stranded methylated DNA bindingAT1G57820
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT1G57820 AT1G66040 AT1G66050 AT4G08590 AT5G39550

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0010369ISOPLAZA Integrative OrthologychromocenterAT1G57820
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G57820 AT1G66040 AT1G66050 AT5G39550
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT4G08590

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR001965Zinc finger, PHD-type
IPR015947PUA-like domain
IPR019786Zinc finger, PHD-type, conserved site
IPR018957Zinc finger, C3HC4 RING-type
IPR017907Zinc finger, RING-type, conserved site
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR019787Zinc finger, PHD-finger
IPR011011Zinc finger, FYVE/PHD-type
IPR003105SRA-YDG

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.