Gene: MA00G04240 (Musa acuminata)

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Gene Identifier
MA00G04240
Transcript Identifier
MA00G04240.1
Gene Type
Coding gene
Location
chrUn_random : 17853921-17860124 : positive

Family

Gene family
HOM03M001425
(53 genes in 16 species)
specific family

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Descriptions

Description
CC_gene:top6A,CC_gene:SPO11-1,CC_gene:Spo11,CC_gene:SPO11,CC_gene:TOP6A,CC_gene:SPO11-2,CC_functional_completeness:modules,PRODUCT:Meiotic recombination protein SPO11-2,GO:0008270,GO:0006259,GO:0005694,GO:0005524,GO:0005515,GO:0003824,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:5.99.1.3
Description (AnnoMine)
Meiotic recombination protein SPO11-2

Identifiers

Identifier Name
GeneNameGSMUA_AchrUn_randomG04110_001
pidGSMUA_AchrUn_randomP04110_001
idGSMUA_AchrUn_randomT04110_001
tidGSMUA_AchrUn_randomT04110_001

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006259IEAInterProDNA metabolic process
GO:0009957ISOPLAZA Integrative Orthologyepidermal cell fate specificationAT5G02820
GO:0051026ISOPLAZA Integrative Orthologychiasma assemblyAT1G63990
GO:0042138ISOPLAZA Integrative Orthologymeiotic DNA double-strand break formationAT1G63990
GO:0048437ISOPLAZA Integrative Orthologyfloral organ developmentAT1G63990
GO:0048316ISOPLAZA Integrative Orthologyseed developmentAT1G63990
GO:0009555ISOPLAZA Integrative Orthologypollen developmentAT1G63990
GO:0009553ISOPLAZA Integrative Orthologyembryo sac developmentAT1G63990
GO:0007126ISOPLAZA Integrative OrthologymeiosisAT1G63990

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0003824IEAInterProcatalytic activity
GO:0005524IEAInterProATP binding
GO:0003677IEAInterProDNA binding
GO:0042802ISOPLAZA Integrative Orthologyidentical protein bindingAT5G02820
GO:0003918ISOPLAZA Integrative OrthologyDNA topoisomerase type II (ATP-hydrolyzing) activityAT5G02820

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005694IEAInterProchromosome
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G02820

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013049Spo11/DNA topoisomerase VI, subunit A, N-terminal
IPR001841Zinc finger, RING-type
IPR002815Spo11/DNA topoisomerase VI, subunit A
IPR011991Winged helix-turn-helix DNA-binding domain
IPR013083Zinc finger, RING/FYVE/PHD-type

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.