Gene: HV7610G00010 (Hordeum vulgare)

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Gene Identifier
HV7610G00010
Transcript Identifier
HV7610G00010.1
Gene Type
Coding gene
Location
contig_7610 : 99-3383 : negative

Family

Gene family
HOM03M000659
(104 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
protein ligase COP1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameMLOC_77543
pidMLOC_77543.1
idMLOC_77543.1
tidMLOC_77543.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009641ISOPLAZA Integrative Orthologyshade avoidanceAT2G32950
GO:0009649ISOPLAZA Integrative Orthologyentrainment of circadian clockAT2G32950
GO:0006281ISOPLAZA Integrative OrthologyDNA repairAT2G32950
GO:0048573ISOPLAZA Integrative Orthologyphotoperiodism, floweringAT2G32950
GO:0046283ISOPLAZA Integrative Orthologyanthocyanin-containing compound metabolic processAT2G32950
GO:0010119ISOPLAZA Integrative Orthologyregulation of stomatal movementAT2G32950
GO:0009647ISOPLAZA Integrative OrthologyskotomorphogenesisAT2G32950
GO:0009640ISOPLAZA Integrative OrthologyphotomorphogenesisAT2G32950

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT2G32950
GO:0043167IEAPLAZA Homologyion bindingHOM03M000659

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016604ISOPLAZA Integrative Orthologynuclear bodyAT2G32950
GO:0000152ISOPLAZA Integrative Orthologynuclear ubiquitin ligase complexAT2G32950
GO:0005634ISOPLAZA Integrative OrthologynucleusAT2G32950

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001680WD40 repeat
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR015943WD40/YVTN repeat-like-containing domain
IPR019775WD40 repeat, conserved site
IPR017907Zinc finger, RING-type, conserved site
IPR017986WD40-repeat-containing domain
IPR001841Zinc finger, RING-type

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.