Gene: HV1578638G00010 (Hordeum vulgare)

Overview top

Gene Identifier
HV1578638G00010
Transcript Identifier
HV1578638G00010.1
Gene Type
Coding gene
Location
contig_1578638 : 1058-1595 : negative

Family

Gene family
HOM03M003679
(24 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
cap-binding protein subunit 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameMLOC_17939
pidMLOC_17939.1
idMLOC_17939.1
tidMLOC_17939.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0045292IEAInterPromRNA cis splicing, via spliceosome
GO:0031053ISOPLAZA Integrative Orthologyprimary miRNA processingAT5G44200
GO:0000394ISOPLAZA Integrative OrthologyRNA splicing, via endonucleolytic cleavage and ligationAT5G44200
GO:0016070ISOPLAZA Integrative OrthologyRNA metabolic processAT5G44200

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000339IEAInterProRNA cap binding
GO:0000166IEAInterPronucleotide binding
GO:0003676IEAInterPronucleic acid binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G44200
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03M003679

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005846IEAInterPronuclear cap binding complex
GO:0005845ISOPLAZA Integrative OrthologymRNA cap binding complexAT5G44200

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000504RNA recognition motif domain
IPR027157Nuclear cap-binding protein subunit 2
IPR012677Nucleotide-binding, alpha-beta plait

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.