PLAZA 3.0 Monocots gene overview : HV106271G00010

Gene: HV106271G00010 (Hordeum vulgare)

Overview

Gene Identifier: HV106271G00010
Transcript Identifier: HV106271G00010.1
Gene Type: Coding gene
Location: contig_106271 : 212-5436 : negative

Family

Gene family: HOM03M000749
(94 genes in 16 species)
specific family
Subfamily: ORTHO03M000735
(12 genes in 10 species)
specific family

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Descriptions

Description (AnnoMine): Tetracenomycin C polyketide putative beta-ketoacyl synthase

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
GeneName	MLOC_804
pid	MLOC_804.3
id	MLOC_804.3
tid	MLOC_804.3

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0008152	IEA	InterPro	metabolic process
GO:0006633	IEA	InterPro	fatty acid biosynthetic process
GO:0009793	ISO	PLAZA Integrative Orthology	embryo development ending in seed dormancy	AT1G74960
GO:0009631	ISO	PLAZA Integrative Orthology	cold acclimation	AT1G74960
GO:0006636	ISO	PLAZA Integrative Orthology	unsaturated fatty acid biosynthetic process	AT1G74960

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016747	IEA	InterPro	transferase activity, transferring acyl groups other than amino-acyl groups
GO:0003824	IEA	InterPro	catalytic activity
GO:0004315	ISO	PLAZA Integrative Orthology	3-oxoacyl-[acyl-carrier-protein] synthase activity	AT1G74960

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009570	ISO	PLAZA Integrative Orthology	chloroplast stroma	AT1G74960
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT1G74960

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR017568	3-oxoacyl-[acyl-carrier-protein] synthase 2
IPR016039	Thiolase-like
IPR018201	Beta-ketoacyl synthase, active site
IPR014031	Beta-ketoacyl synthase, C-terminal
IPR020841	Polyketide synthase, beta-ketoacyl synthase domain
IPR016038	Thiolase-like, subgroup
IPR014030	Beta-ketoacyl synthase, N-terminal

No MapMan annotations defined for this gene.

SignalP	Description
SignalP-noTM	Signal Peptide detected using noTM network