PLAZA 3.0 Monocots gene overview : CR06G09940

Gene: CR06G09940 (Chlamydomonas reinhardtii)

Overview

Gene Identifier: CR06G09940
Transcript Identifier: CR06G09940.1
Gene Type: Coding gene
Location: chromosome_6 : 5423808-5428182 : negative

Family

Gene family: HOM03M016641
(2 genes in 1 species)
specific family
Duplication type: Tandem duplicate

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Descriptions

Description (AnnoMine): Ammonium transporter Rh type

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Cre06.g284150.t1.3
id	PAC:27568606

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...the gene in Genomeview, a genome browser
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0015696	IEA	InterPro	ammonium transport

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0008519	IEA	InterPro	ammonium transmembrane transporter activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016020	IEA	InterPro	membrane

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR024041	Ammonium transporter AmtB-like domain
IPR002229	Blood group Rhesus C/E/D polypeptide

Mapman id	Description
34.5	transport.ammonium

No SignalP domains detected for this gene.