PLAZA 3.0 Monocots gene overview : CR03G06940

Gene: CR03G06940 (Chlamydomonas reinhardtii)

Overview

Gene Identifier: CR03G06940
Transcript Identifier: CR03G06940.1
Gene Type: Coding gene
Location: chromosome_3 : 4067079-4070757 : negative

Family

Gene family: HOM03M000156
(308 genes in 16 species)
specific family
Subfamily: ORTHO03M026358
(2 genes in 2 species)
specific family

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Descriptions

Description (AnnoMine): Tubulin beta

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Cre03.g172650.t1.2
id	PAC:27576807

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006184	IEA	InterPro	GTP catabolic process
GO:0051297	IEA	InterPro	centrosome organization
GO:0051258	IEA	InterPro	protein polymerization
GO:0007017	IEA	InterPro	microtubule-based process
GO:0009203	IEA	PLAZA Homology	ribonucleoside triphosphate catabolic process	HOM03M000156
GO:0009205	IEA	PLAZA Homology	purine ribonucleoside triphosphate metabolic process	HOM03M000156
GO:0043623	IEA	PLAZA Homology	cellular protein complex assembly	HOM03M000156
GO:0009207	IEA	PLAZA Homology	purine ribonucleoside triphosphate catabolic process	HOM03M000156
GO:0046128	IEA	PLAZA Homology	purine ribonucleoside metabolic process	HOM03M000156
GO:0006753	IEA	PLAZA Homology	nucleoside phosphate metabolic process	HOM03M000156
GO:0046130	IEA	PLAZA Homology	purine ribonucleoside catabolic process	HOM03M000156
GO:0006152	IEA	PLAZA Homology	purine nucleoside catabolic process	HOM03M000156
GO:0042454	IEA	PLAZA Homology	ribonucleoside catabolic process	HOM03M000156
GO:0019439	IEA	PLAZA Homology	aromatic compound catabolic process	HOM03M000156
GO:0046700	IEA	PLAZA Homology	heterocycle catabolic process	HOM03M000156
GO:1901292	IEA	PLAZA Homology	nucleoside phosphate catabolic process	HOM03M000156
GO:0019637	IEA	PLAZA Homology	organophosphate metabolic process	HOM03M000156
GO:0016043	IEA	PLAZA Homology	cellular component organization	HOM03M000156
GO:1901575	IEA	PLAZA Homology	organic substance catabolic process	HOM03M000156
GO:0019693	IEA	PLAZA Homology	ribose phosphate metabolic process	HOM03M000156
GO:0044085	IEA	PLAZA Homology	cellular component biogenesis	HOM03M000156
GO:1901069	IEA	PLAZA Homology	guanosine-containing compound catabolic process	HOM03M000156
GO:1901068	IEA	PLAZA Homology	guanosine-containing compound metabolic process	HOM03M000156
GO:0044281	IEA	PLAZA Homology	small molecule metabolic process	HOM03M000156
GO:0009261	IEA	PLAZA Homology	ribonucleotide catabolic process	HOM03M000156
GO:0071840	IEA	PLAZA Homology	cellular component organization or biogenesis	HOM03M000156
GO:1901565	IEA	PLAZA Homology	organonitrogen compound catabolic process	HOM03M000156
GO:0042278	IEA	PLAZA Homology	purine nucleoside metabolic process	HOM03M000156
GO:1901564	IEA	PLAZA Homology	organonitrogen compound metabolic process	HOM03M000156
GO:0009199	IEA	PLAZA Homology	ribonucleoside triphosphate metabolic process	HOM03M000156
GO:0009056	IEA	PLAZA Homology	catabolic process	HOM03M000156
GO:0055086	IEA	PLAZA Homology	nucleobase-containing small molecule metabolic process	HOM03M000156
GO:1901361	IEA	PLAZA Homology	organic cyclic compound catabolic process	HOM03M000156
GO:0034655	IEA	PLAZA Homology	nucleobase-containing compound catabolic process	HOM03M000156
GO:0072521	IEA	PLAZA Homology	purine-containing compound metabolic process	HOM03M000156
GO:0072523	IEA	PLAZA Homology	purine-containing compound catabolic process	HOM03M000156
GO:0009116	IEA	PLAZA Homology	nucleoside metabolic process	HOM03M000156
GO:0009119	IEA	PLAZA Homology	ribonucleoside metabolic process	HOM03M000156
GO:0006163	IEA	PLAZA Homology	purine nucleotide metabolic process	HOM03M000156
GO:0009259	IEA	PLAZA Homology	ribonucleotide metabolic process	HOM03M000156
GO:0009117	IEA	PLAZA Homology	nucleotide metabolic process	HOM03M000156
GO:0071822	IEA	PLAZA Homology	protein complex subunit organization	HOM03M000156
GO:0009146	IEA	PLAZA Homology	purine nucleoside triphosphate catabolic process	HOM03M000156
GO:0009144	IEA	PLAZA Homology	purine nucleoside triphosphate metabolic process	HOM03M000156
GO:0009143	IEA	PLAZA Homology	nucleoside triphosphate catabolic process	HOM03M000156
GO:0070271	IEA	PLAZA Homology	protein complex biogenesis	HOM03M000156
GO:0009141	IEA	PLAZA Homology	nucleoside triphosphate metabolic process	HOM03M000156
GO:0046434	IEA	PLAZA Homology	organophosphate catabolic process	HOM03M000156
GO:0043933	IEA	PLAZA Homology	macromolecular complex subunit organization	HOM03M000156
GO:0006195	IEA	PLAZA Homology	purine nucleotide catabolic process	HOM03M000156
GO:0044712	IEA	PLAZA Homology	single-organism catabolic process	HOM03M000156
GO:0044270	IEA	PLAZA Homology	cellular nitrogen compound catabolic process	HOM03M000156
GO:0065003	IEA	PLAZA Homology	macromolecular complex assembly	HOM03M000156
GO:1901657	IEA	PLAZA Homology	glycosyl compound metabolic process	HOM03M000156
GO:1901658	IEA	PLAZA Homology	glycosyl compound catabolic process	HOM03M000156
GO:0009166	IEA	PLAZA Homology	nucleotide catabolic process	HOM03M000156
GO:0009164	IEA	PLAZA Homology	nucleoside catabolic process	HOM03M000156
GO:0022607	IEA	PLAZA Homology	cellular component assembly	HOM03M000156
GO:0046039	IEA	PLAZA Homology	GTP metabolic process	HOM03M000156
GO:0034622	IEA	PLAZA Homology	cellular macromolecular complex assembly	HOM03M000156
GO:0009150	IEA	PLAZA Homology	purine ribonucleotide metabolic process	HOM03M000156
GO:1901136	IEA	PLAZA Homology	carbohydrate derivative catabolic process	HOM03M000156
GO:1901135	IEA	PLAZA Homology	carbohydrate derivative metabolic process	HOM03M000156
GO:0009154	IEA	PLAZA Homology	purine ribonucleotide catabolic process	HOM03M000156
GO:0006461	IEA	PLAZA Homology	protein complex assembly	HOM03M000156
GO:0044248	IEA	PLAZA Homology	cellular catabolic process	HOM03M000156

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003924	IEA	InterPro	GTPase activity
GO:0005525	IEA	InterPro	GTP binding
GO:0016817	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides	HOM03M000156
GO:0035639	IEA	PLAZA Homology	purine ribonucleoside triphosphate binding	HOM03M000156
GO:0016818	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	HOM03M000156
GO:0019001	IEA	PLAZA Homology	guanyl nucleotide binding	HOM03M000156
GO:0005198	IEA	PLAZA Homology	structural molecule activity	HOM03M000156
GO:0032561	IEA	PLAZA Homology	guanyl ribonucleotide binding	HOM03M000156
GO:0016462	IEA	PLAZA Homology	pyrophosphatase activity	HOM03M000156
GO:0017111	IEA	PLAZA Homology	nucleoside-triphosphatase activity	HOM03M000156
GO:0005200	IEA	PLAZA Homology	structural constituent of cytoskeleton	HOM03M000156

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0043234	IEA	InterPro	protein complex
GO:0005874	IEA	InterPro	microtubule
GO:0000242	IEA	InterPro	pericentriolar material
GO:0044430	IEA	PLAZA Homology	cytoskeletal part	HOM03M000156
GO:0044422	IEA	PLAZA Homology	organelle part	HOM03M000156
GO:0043228	IEA	PLAZA Homology	non-membrane-bounded organelle	HOM03M000156
GO:0032991	IEA	PLAZA Homology	macromolecular complex	HOM03M000156
GO:0005856	IEA	PLAZA Homology	cytoskeleton	HOM03M000156
GO:0043232	IEA	PLAZA Homology	intracellular non-membrane-bounded organelle	HOM03M000156
GO:0015630	IEA	PLAZA Homology	microtubule cytoskeleton	HOM03M000156
GO:0044446	IEA	PLAZA Homology	intracellular organelle part	HOM03M000156

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR008280	Tubulin/FtsZ, C-terminal
IPR004057	Epsilon tubulin
IPR000217	Tubulin
IPR017975	Tubulin, conserved site
IPR023123	Tubulin, C-terminal
IPR003008	Tubulin/FtsZ, GTPase domain
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain

Mapman id	Description
31.1	cell.organisation

No SignalP domains detected for this gene.