Gene: CR02G01320 (Chlamydomonas reinhardtii)

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Gene Identifier
CR02G01320
Transcript Identifier
CR02G01320.1
Gene Type
Coding gene
Location
chromosome_2 : 760021-765293 : positive

Family

Gene family
HOM03M000279
(195 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Probable lysine-specific demethylase 4B
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidCre02.g078700.t1.3
idPAC:27575857

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT2G34880
GO:0009555ISOPLAZA Integrative Orthologypollen developmentAT2G34880
GO:0048573ISOPLAZA Integrative Orthologyphotoperiodism, floweringAT4G20400
GO:0009910ISOPLAZA Integrative Orthologynegative regulation of flower developmentAT4G20400
GO:0034720ISOPLAZA Integrative Orthologyhistone H3-K4 demethylationAT4G20400
GO:0010216ISOPLAZA Integrative Orthologymaintenance of DNA methylationAT4G20400
GO:0048577ISOPLAZA Integrative Orthologynegative regulation of short-day photoperiodism, floweringAT5G04240
GO:0048579ISOPLAZA Integrative Orthologynegative regulation of long-day photoperiodism, floweringAT5G04240
GO:0009741ISOPLAZA Integrative Orthologyresponse to brassinosteroidAT5G04240
GO:0009826ISOPLAZA Integrative Orthologyunidimensional cell growthAT5G04240
GO:0033169ISOPLAZA Integrative Orthologyhistone H3-K9 demethylationAT5G04240
GO:0010200ISOPLAZA Integrative Orthologyresponse to chitinAT5G46910

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0003677IEAInterProDNA binding
GO:0032453ISOPLAZA Integrative Orthologyhistone demethylase activity (H3-K4 specific)AT4G20400

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0000785IEAInterProchromatin

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR017956AT hook, DNA-binding motif
IPR000637HMG-I/HMG-Y, DNA-binding, conserved site
IPR020478AT hook-like
IPR003349Transcription factor jumonji, JmjN
IPR003347JmjC domain
IPR000116High mobility group, HMG-I/HMG-Y

Mapman id Description
27.3.57RNA.regulation of transcription.JUMONJI family
No SignalP domains detected for this gene.