Gene: CPCG00130 (Carica papaya)
Overview 
- Gene Identifier
- CPCG00130
- Transcript Identifier
- CPCG00130.1
- Gene Type
- Coding gene
- Location
- chloroplast : 11031-12548 : negative
Family
- Gene family
- Subfamily
Descriptions
- Description
-
ATP synthase subunit alpha, chloroplastic
- Description (AnnoMine)
-
ATP synthase subunit alpha
Identifiers
Identifier | Name |
---|---|
pid | ABY86767.1 |
uniprot | B1A920 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0046034 | IEA | Genome Project | ATP metabolic process | |
GO:0015986 | IEA | Genome Project | ATP synthesis coupled proton transport | |
GO:0015992 | IEA | Genome Project | proton transport | |
GO:0015991 | IEA | UniProt | ATP hydrolysis coupled proton transport | |
GO:0042777 | IEA | UniProt | plasma membrane ATP synthesis coupled proton transport | |
GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | ATMG01190 |
GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | ATCG00120 |
GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | ATCG00120 |
GO:0006176 | ISO | PLAZA Integrative Orthology | dATP biosynthetic process from ADP | ATCG00120 |
GO:0015988 | IEA | PLAZA Homology | energy coupled proton transmembrane transport, against electrochemical gradient | HOM03M001076 |
GO:0015985 | IEA | PLAZA Homology | energy coupled proton transport, down electrochemical gradient | HOM03M001076 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0016820 | IEA | Genome Project | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | |
GO:0046961 | IEA | Genome Project | proton-transporting ATPase activity, rotational mechanism | |
GO:0046933 | IEA | Genome Project | proton-transporting ATP synthase activity, rotational mechanism | |
GO:0005524 | IEA | UniProt | ATP binding | |
GO:0050897 | ISO | PLAZA Integrative Orthology | cobalt ion binding | ATMG01190 |
GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | ATMG01190 ATCG00120 AT2G07698 |
GO:0005507 | ISO | PLAZA Integrative Orthology | copper ion binding | ATMG01190 |
GO:0008266 | ISO | PLAZA Integrative Orthology | poly(U) RNA binding | AT2G07698 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0045261 | IEA | Genome Project | proton-transporting ATP synthase complex, catalytic core F(1) | |
GO:0033178 | IEA | Genome Project | proton-transporting two-sector ATPase complex, catalytic domain | |
GO:0016469 | IEA | Genome Project | proton-transporting two-sector ATPase complex | |
GO:0009535 | IEA | UniProt | chloroplast thylakoid membrane | |
GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | OSMG00820 ATMG01190 ATCG00120 AT2G07698 |
GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | OSCG00350 OS04G16740 |
GO:0005753 | ISO | PLAZA Integrative Orthology | mitochondrial proton-transporting ATP synthase complex | ATMG01190 |
GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | ATMG01190 |
GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | ATCG00120 |
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG00120 AT2G07698 |
GO:0016020 | ISO | PLAZA Integrative Orthology | membrane | ATCG00120 AT2G07698 |
GO:0010319 | ISO | PLAZA Integrative Orthology | stromule | ATCG00120 |
GO:0010287 | ISO | PLAZA Integrative Orthology | plastoglobule | ATCG00120 |
GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | ATCG00120 |
GO:0031977 | ISO | PLAZA Integrative Orthology | thylakoid lumen | ATCG00120 |
GO:0009544 | ISO | PLAZA Integrative Orthology | chloroplast ATP synthase complex | ATCG00120 |
GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT2G07698 |
GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT2G07698 |
GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT2G07698 |
GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT2G07698 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
InterPro | Description |
---|---|
IPR004100 | ATPase, F1 complex alpha/beta subunit, N-terminal domain |
IPR000194 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain |
IPR005294 | ATPase, F1 complex, alpha subunit |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
IPR000793 | ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal |
IPR023366 | ATP synthase subunit alpha-like domain |
IPR020003 | ATPase, alpha/beta subunit, nucleotide-binding domain, active site |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.