PLAZA 3.0 Monocots gene overview : CP35467G00010

Gene: CP35467G00010 (Carica papaya)

Overview

Gene Identifier: CP35467G00010
Transcript Identifier: CP35467G00010.1
Gene Type: Coding gene
Location: contig_35467 : 1083-2286 : positive

Family

Gene family: HOM03M000900
(79 genes in 15 species)
specific family
Subfamily: ORTHO03M026299
(2 genes in 2 species)
specific family

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Descriptions

Description (AnnoMine): pore potassium channel a

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.contig_35467.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006813	IEA	Genome Project	potassium ion transport
GO:0071805	IEA	InterPro	potassium ion transmembrane transport
GO:0071804	IEA	PLAZA Homology	cellular potassium ion transport	HOM03M000900

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005267	IEA	Genome Project	potassium channel activity
GO:0005509	IEA	InterPro	calcium ion binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016020	IEA	Genome Project	membrane

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR003280	Two pore domain potassium channel
IPR013099	Two pore domain potassium channel domain
IPR002048	EF-hand domain
IPR011992	EF-hand domain pair
IPR018247	EF-Hand 1, calcium-binding site

Mapman id	Description
34.15	transport.potassium

No SignalP domains detected for this gene.