PLAZA 3.0 Monocots gene overview : CP32646G00010

Gene: CP32646G00010 (Carica papaya)

Overview

Gene Identifier: CP32646G00010
Transcript Identifier: CP32646G00010.1
Gene Type: Coding gene
Location: contig_32646 : 4122-4919 : negative

Family

Gene family: HOM03M004875
(20 genes in 13 species)
specific family

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Descriptions

Description (AnnoMine): Cytochrome c oxidase subunit 3

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.contig_32646.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006123	IEA	Genome Project	mitochondrial electron transport, cytochrome c to oxygen
GO:0022904	IEA	InterPro	respiratory electron transport chain
GO:0019646	IEA	InterPro	aerobic electron transport chain

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004129	IEA	Genome Project	cytochrome-c oxidase activity
GO:0015002	IEA	InterPro	heme-copper terminal oxidase activity
GO:0016675	IEA	PLAZA Homology	oxidoreductase activity, acting on a heme group of donors	HOM03M004875
GO:0016676	IEA	PLAZA Homology	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor	HOM03M004875

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016020	IEA	Genome Project	membrane
GO:0005751	ISO	PLAZA Integrative Orthology	mitochondrial respiratory chain complex IV	ATMG00730

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR000298	Cytochrome c oxidase, subunit III
IPR024791	Cytochrome c/ubiquinol oxidase subunit III
IPR013833	Cytochrome c oxidase, subunit III, 4-helical bundle

Mapman id	Description
9.7	mitochondrial electron transport / ATP synthesis.cytochrome c oxidase

No SignalP domains detected for this gene.