Gene: CP28699G00010 (Carica papaya)

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Gene Identifier
CP28699G00010
Transcript Identifier
CP28699G00010.1
Gene Type
Coding gene
Location
contig_28699 : 1681-4044 : positive

Family

Gene family
HOM03M001628
(48 genes in 16 species)
specific family
Subfamily
ORTHO03M001751
(10 genes in 10 species)
specific family

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Descriptions

Description (AnnoMine)
repair endonuclease UVH1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.contig_28699.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006259IEAGenome ProjectDNA metabolic process
GO:0006289ISOPLAZA Integrative Orthologynucleotide-excision repairAT5G41150
GO:0006979ISOPLAZA Integrative Orthologyresponse to oxidative stressAT5G41150
GO:0000724ISOPLAZA Integrative Orthologydouble-strand break repair via homologous recombinationAT5G41150
GO:0006281ISOPLAZA Integrative OrthologyDNA repairAT5G41150
GO:0009314ISOPLAZA Integrative Orthologyresponse to radiationAT5G41150
GO:0006457IEAPLAZA Homologyprotein foldingHOM03M001628

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0005515IEAGenome Projectprotein binding
GO:0004518IEAGenome Projectnuclease activity
GO:0000014ISOPLAZA Integrative Orthologysingle-stranded DNA endodeoxyribonuclease activityAT5G41150
GO:0003755IEAPLAZA Homologypeptidyl-prolyl cis-trans isomerase activityHOM03M001628

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR010994RuvA domain 2-like
IPR006166ERCC4 domain
IPR020819DNA repair nuclease, XPF-type/Helicase
IPR011335Restriction endonuclease type II-like

Mapman id Description
28.1DNA.synthesis/chromatin structure
No SignalP domains detected for this gene.